PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA49329.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 339aa    MW: 37753.5 Da    PI: 6.4028
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA49329.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH154.4e-052733111255
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  PKA49329.1 273 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 311
                 7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MIKPYFYKRD QKEEIMESSN MIDLHHLPDD HLLLLPPSAL GDHFWSHDCP LFSTNGSEYS  60
TPSISEAQVS DPFSSTDMVE DLGQIHVGNV KEEISKSCHQ SPSTFRHGVE DQQRVLIHRM  120
TKSYNQYYSS IGEDQCLGLD IPMNFGTVFP SINISSSNLP SMAPWLKTSL GMGTHHDQAQ  180
DLLGSALFSF GRMDIPSSHQ YIHGCHPFLD SMVQAQGASI SSLHEIPPSV NGGTGYQAKR  240
ASSGSMDQLN AAQMGAKKPR IEPRSSFSPF KVRKEKLGDR IAALQQLVAP FGKTDTASVL  300
MEAIGYIKFL QDQVETLSVP YEIFQQHDFA TSRRDIKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.12e-33bHLH family protein