PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA49278.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 269aa    MW: 30299.1 Da    PI: 9.0706
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA49278.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.3e-10181224755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++ ++RR+ri +++  L+el+P+      +K++ +++LekA+ Y+k Lq
  PKA49278.1 181 IAAKNRRERISERLKILQELVPNG-----TKVDLVTMLEKAISYVKFLQ 224
                 5679******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MAFSHGIDTS SLEYASFKGM HSFMHEEEEE EGCSENYTSS LFSSFHNPNN LFSSSIIFGA  60
PNFPFQEAPP DFSFKPRREK WPAANSNSSV LSFEQRKLGR GDQNSISWVS SIDHEHQMQQ  120
LSLKHGGEKE FGLLFQRSGV EKSLQKRLSM GGDQIEASKK QCGNNRKLKA KPNPPKDPQS  180
IAAKNRRERI SERLKILQEL VPNGTKVDLV TMLEKAISYV KFLQLQVKVL ATDEFWPAHG  240
GKPPDASQVK EAIDDILSSH RDRKSTSKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.17e-53bHLH family protein