PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA49073.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 345aa MW: 39043.4 Da PI: 6.6613 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.6 | 9.2e-18 | 131 | 184 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k PKA49073.1 131 KKRRLNMEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 184 456899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 131.2 | 4.1e-42 | 130 | 222 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl+ eqv++LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdye Lkr++da+k++n++L++++++L++e+++ PKA49073.1 130 EKKRRLNMEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYELLKRQFDAIKADNDALHSNNTKLQAEIMA 222 69**************************************************************************************99975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 345 aa Download sequence |
MRLVEENMTS SSNGSMAPSP FFSPTNFILQ MQSTTDTDSH DHHHHHHHHH HHEGDRRGTD 60 DNHHQPPIIP ILNPLLPCSI NIPHDFSRSA GMAAMVGIKR TSMSFSAGNV NETCEGEVDE 120 LSDDCSQAGE KKRRLNMEQV RTLEKNFELG NKLEPERKMQ LARALGLQPR QIAIWFQNRR 180 ARWKTKQLEK DYELLKRQFD AIKADNDALH SNNTKLQAEI MALRGREAPE RINLNKETEG 240 SSSNRSENSS EINLDISRTT STATAAPSDS PLNPNVHSIP FFQSGRPPPV ISQLLQSSSS 300 SRQDSLHCIK MEQPGAVTEE NLSNLLCGME DQNAFWPWPD HHHFH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 179 | 187 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 9e-69 | HD-ZIP family protein |