PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA48860.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

FAR1

Protein Properties

Length: 836aa MW: 95553.8 Da PI: 7.786

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA48860.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.8	2.8e-26	47	134	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA e+GFs+r+s+ + ++ ge+++rtf+Cs+eg r ++k+k e+ +++r etr++C+aklk++++ +gk++v ++ +HnHela PKA48860.1 47 EFYNRYAFEMGFSIRRSSRHLLRKGGEVKDRTFCCSREGIRGKDKRK-ENVQNPRYETRCNCNAKLKISLR-NGKYYVFQFIADHNHELA 134 6*****************************************999.999****************.**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 836 aa Download sequence
MAHESTEHCP SFNECSNGDS EQLALSFPDE WIPKVDMEFE TEQEAYEFYN RYAFEMGFSI 60 RRSSRHLLRK GGEVKDRTFC CSREGIRGKD KRKENVQNPR YETRCNCNAK LKISLRNGKY 120 YVFQFIADHN HELATRTQVH RLRSHRHITP VQAMTNTGIS PKPTFDLMSV DVDGHENLGF 180 ILDFGNDPRA EQSMAIKIGD GGGVLEYLEK MQLEDPKFFY SVQVDKLHAT NIFWADSRMI 240 ADYENFGDVV CFDTTCRRLN DNRVFGLLVG VNNHKQVIVF GASFLHVESS ESFKWMFSAF 300 LKAMSGKRPK TVLSDEDLAI GKAIKMCMPE TNYRICGWQV CQNIFCHLSE VVGDYKSFCI 360 DFSSCIYNHD EEASFIDSWN AMIVKHKLVG NAYLQRLFEK REQWVLVYGR DIFYAGICHV 420 QRSDSMHKEL KNFLNTSNDE LMFFKQLERL VQDRRYEELK ADFTASQSTP KLKANLGILK 480 HAAQIYTPAI FKMFQDEVLQ TWNCDMHFCG ETGSISTYKL KTSGKMQEHM VIYDLLKGSV 540 KCTCKNFEFL GILCTHALKV LDFRNIRTIP EGYILKRWMK DAKTIGLVGT CAPCLDPKVE 600 RRRRHKELCR LFVQVAAKAA ETEETYAIAA GQASKLLQEV EKKLRKRSKS DLDGDRAGLE 660 ALEVELGPTE EANVSNRDQI CSTKLKGMKD INIKKKKKFR RFQQNSAAGV EQSASDIHLS 720 KDLSNPNNEP LQRNAPPSVG RDCPEDNFSR QHPQPPNANL WLDLSQPPPV GATSLIADSF 780 QLQVVQASSF NPTIYHIQNP STSIPLNQQG HLNMLQQFEP QIHSLSRQLF SGSAEG

Sequence ? help Back to Top

Protein Sequence Length: 836 aa Download sequence

MAHESTEHCP SFNECSNGDS EQLALSFPDE WIPKVDMEFE TEQEAYEFYN RYAFEMGFSI  60
RRSSRHLLRK GGEVKDRTFC CSREGIRGKD KRKENVQNPR YETRCNCNAK LKISLRNGKY  120
YVFQFIADHN HELATRTQVH RLRSHRHITP VQAMTNTGIS PKPTFDLMSV DVDGHENLGF  180
ILDFGNDPRA EQSMAIKIGD GGGVLEYLEK MQLEDPKFFY SVQVDKLHAT NIFWADSRMI  240
ADYENFGDVV CFDTTCRRLN DNRVFGLLVG VNNHKQVIVF GASFLHVESS ESFKWMFSAF  300
LKAMSGKRPK TVLSDEDLAI GKAIKMCMPE TNYRICGWQV CQNIFCHLSE VVGDYKSFCI  360
DFSSCIYNHD EEASFIDSWN AMIVKHKLVG NAYLQRLFEK REQWVLVYGR DIFYAGICHV  420
QRSDSMHKEL KNFLNTSNDE LMFFKQLERL VQDRRYEELK ADFTASQSTP KLKANLGILK  480
HAAQIYTPAI FKMFQDEVLQ TWNCDMHFCG ETGSISTYKL KTSGKMQEHM VIYDLLKGSV  540
KCTCKNFEFL GILCTHALKV LDFRNIRTIP EGYILKRWMK DAKTIGLVGT CAPCLDPKVE  600
RRRRHKELCR LFVQVAAKAA ETEETYAIAA GQASKLLQEV EKKLRKRSKS DLDGDRAGLE  660
ALEVELGPTE EANVSNRDQI CSTKLKGMKD INIKKKKKFR RFQQNSAAGV EQSASDIHLS  720
KDLSNPNNEP LQRNAPPSVG RDCPEDNFSR QHPQPPNANL WLDLSQPPPV GATSLIADSF  780
QLQVVQASSF NPTIYHIQNP STSIPLNQQG HLNMLQQFEP QIHSLSRQLF SGSAEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-109	FAR1 family protein