PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA48738.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WOX

Protein Properties

Length: 349aa MW: 37312.8 Da PI: 6.7987

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA48738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.9	7.1e-18	53	113	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ PKA48738.1 53 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRRIRAQLqeygQVGDANVFYWFQNRKSRSKH 113 89***************99***********************************995 PP
2	Wus_type_Homeobox	113.1	1.4e-36	52	115	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+P+peQi+iLe++++sG+++P+++ei+ri+a+L+eyG+++d+NVfyWFQNrk+R+++kq PKA48738.1 52 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHKQ 115 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MASSNRHWPS LFKSKPSSCA ASAHHQWPHD IISPCQKPNS YSPGVEERAP EPKPRWNPKP 60 EQIRILEAIF NSGMVNPPRD EIRRIRAQLQ EYGQVGDANV FYWFQNRKSR SKHKQRHLKS 120 AAAAGARSST SSANPPASAP PPAATSSSSS SSDRSSSGSD KQILPLSAAS GDLSAMLDLS 180 ASPTPSVNQY SLFHNPLAIP ELSLEASLYL PAIPPSFSGD FPSGVPASAL WGDLLMPGVN 240 GKNAVLGGLG LSFTDPSSSP DPPPPFSPNL TTTAMASELQ AAARSTVFIN EVAYELFPGP 300 VNVREAFGEE AILLHSSGQP VLTDEWGLTL QPLQHGASYY LVNLLSIDL

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MASSNRHWPS LFKSKPSSCA ASAHHQWPHD IISPCQKPNS YSPGVEERAP EPKPRWNPKP  60
EQIRILEAIF NSGMVNPPRD EIRRIRAQLQ EYGQVGDANV FYWFQNRKSR SKHKQRHLKS  120
AAAAGARSST SSANPPASAP PPAATSSSSS SSDRSSSGSD KQILPLSAAS GDLSAMLDLS  180
ASPTPSVNQY SLFHNPLAIP ELSLEASLYL PAIPPSFSGD FPSGVPASAL WGDLLMPGVN  240
GKNAVLGGLG LSFTDPSSSP DPPPPFSPNL TTTAMASELQ AAARSTVFIN EVAYELFPGP  300
VNVREAFGEE AILLHSSGQP VLTDEWGLTL QPLQHGASYY LVNLLSIDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	2e-57	WOX family protein