PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA48567.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 633aa    MW: 72263.6 Da    PI: 5.652
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA48567.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS379.73.6e-1162596292374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +lL++cA+ v++g++++a++lL++++ ++sp+gd+ qRl +yf+++L+arla+++se++++l++ +++    +++l+a++l+  +sP+ k+s+   Nq
  PKA48567.1 259 HTLLMHCAQTVAAGEHHRAHELLKQIRRHSSPHGDASQRLGHYFANGLEARLAGTGSEVFQSLASMRKT---AADVLKAYQLYLAASPFKKISYHFSNQ 354
                 679*********************************************************999888887...8************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 +Il+a+e+++rvHi+Df+i  G+QWp++++ La+Rp+gpp+lRiTg++ p++g   +e++eetg+ L+++Ae++gvpfe+++ va +l++++ e+Lr++
  PKA48567.1 355 TILDAIEKATRVHILDFGIYFGFQWPCFMKMLAARPGGPPKLRITGIDVPQPGfrPAERIEETGRWLSDYAERFGVPFEYHA-VAAKLDEVRNEDLRLD 452
                 ****************************************************9*****************************.799************* PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 ++E+l+Vn+v++l  l de+v ++ +rd++L+ +++l+P v+v v ++ +++++ F++rf eal+++sa+fd+le++lpre+e+r+ vEr l gr++ n
  PKA48567.1 453 EEETLVVNCVFRLSCLGDETVGVDCPRDKLLRKIRKLNPAVFVNVISNGSYGAPFFVTRFREALYHFSAVFDMLESTLPREEEQRMLVERDLYGRHAIN 551
                 *************************************************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 v++ceg+er++r et+++ r r ++aGF+++p +++ +k a++ +r ++ + ++v+e+  +l++gWk+r Lv++SaW+
  PKA48567.1 552 VISCEGKERVQRPETYKQSRVRCMRAGFEQLPANYEFVKAARSGVRAHYHKDFSVDEDGRWLLQGWKGRILVALSAWK 629
                 *************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 633 aa     Download sequence    
MKNFEYSSLV AIDDFDLTEN PIFDPQISAS PIDETDSNEN SEIFSDLVLE YINQMLMEED  60
MGDKFDMLLT HPDLEATEKP FYELIGEKYP SSPDQPPLYS SPSPDSSDSR RSSGSKAPMS  120
SENGASSFSE EPEDHKDGVD DLLLRTLPQS QFEKGFEEAK KFLPTPSMEV KIAVDRRRPH  180
NDSFDLEEQR SRKQSAVYYE DPIPSQMFDM VLLCGGEKFP EVINTIREAM HKEENGEKKD  240
GRKSRRKKPP EKEEVVDLHT LLMHCAQTVA AGEHHRAHEL LKQIRRHSSP HGDASQRLGH  300
YFANGLEARL AGTGSEVFQS LASMRKTAAD VLKAYQLYLA ASPFKKISYH FSNQTILDAI  360
EKATRVHILD FGIYFGFQWP CFMKMLAARP GGPPKLRITG IDVPQPGFRP AERIEETGRW  420
LSDYAERFGV PFEYHAVAAK LDEVRNEDLR LDEEETLVVN CVFRLSCLGD ETVGVDCPRD  480
KLLRKIRKLN PAVFVNVISN GSYGAPFFVT RFREALYHFS AVFDMLESTL PREEEQRMLV  540
ERDLYGRHAI NVISCEGKER VQRPETYKQS RVRCMRAGFE QLPANYEFVK AARSGVRAHY  600
HKDFSVDEDG RWLLQGWKGR ILVALSAWKP CSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-175GRAS family protein