PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA48567.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 633aa MW: 72263.6 Da PI: 5.652 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 379.7 | 3.6e-116 | 259 | 629 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 +lL++cA+ v++g++++a++lL++++ ++sp+gd+ qRl +yf+++L+arla+++se++++l++ +++ +++l+a++l+ +sP+ k+s+ Nq PKA48567.1 259 HTLLMHCAQTVAAGEHHRAHELLKQIRRHSSPHGDASQRLGHYFANGLEARLAGTGSEVFQSLASMRKT---AADVLKAYQLYLAASPFKKISYHFSNQ 354 679*********************************************************999888887...8************************** PP GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197 +Il+a+e+++rvHi+Df+i G+QWp++++ La+Rp+gpp+lRiTg++ p++g +e++eetg+ L+++Ae++gvpfe+++ va +l++++ e+Lr++ PKA48567.1 355 TILDAIEKATRVHILDFGIYFGFQWPCFMKMLAARPGGPPKLRITGIDVPQPGfrPAERIEETGRWLSDYAERFGVPFEYHA-VAAKLDEVRNEDLRLD 452 ****************************************************9*****************************.799************* PP GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296 ++E+l+Vn+v++l l de+v ++ +rd++L+ +++l+P v+v v ++ +++++ F++rf eal+++sa+fd+le++lpre+e+r+ vEr l gr++ n PKA48567.1 453 EEETLVVNCVFRLSCLGDETVGVDCPRDKLLRKIRKLNPAVFVNVISNGSYGAPFFVTRFREALYHFSAVFDMLESTLPREEEQRMLVERDLYGRHAIN 551 *************************************************************************************************** PP GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 v++ceg+er++r et+++ r r ++aGF+++p +++ +k a++ +r ++ + ++v+e+ +l++gWk+r Lv++SaW+ PKA48567.1 552 VISCEGKERVQRPETYKQSRVRCMRAGFEQLPANYEFVKAARSGVRAHYHKDFSVDEDGRWLLQGWKGRILVALSAWK 629 *************************************************888*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 633 aa Download sequence |
MKNFEYSSLV AIDDFDLTEN PIFDPQISAS PIDETDSNEN SEIFSDLVLE YINQMLMEED 60 MGDKFDMLLT HPDLEATEKP FYELIGEKYP SSPDQPPLYS SPSPDSSDSR RSSGSKAPMS 120 SENGASSFSE EPEDHKDGVD DLLLRTLPQS QFEKGFEEAK KFLPTPSMEV KIAVDRRRPH 180 NDSFDLEEQR SRKQSAVYYE DPIPSQMFDM VLLCGGEKFP EVINTIREAM HKEENGEKKD 240 GRKSRRKKPP EKEEVVDLHT LLMHCAQTVA AGEHHRAHEL LKQIRRHSSP HGDASQRLGH 300 YFANGLEARL AGTGSEVFQS LASMRKTAAD VLKAYQLYLA ASPFKKISYH FSNQTILDAI 360 EKATRVHILD FGIYFGFQWP CFMKMLAARP GGPPKLRITG IDVPQPGFRP AERIEETGRW 420 LSDYAERFGV PFEYHAVAAK LDEVRNEDLR LDEEETLVVN CVFRLSCLGD ETVGVDCPRD 480 KLLRKIRKLN PAVFVNVISN GSYGAPFFVT RFREALYHFS AVFDMLESTL PREEEQRMLV 540 ERDLYGRHAI NVISCEGKER VQRPETYKQS RVRCMRAGFE QLPANYEFVK AARSGVRAHY 600 HKDFSVDEDG RWLLQGWKGR ILVALSAWKP CSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37650.1 | 1e-175 | GRAS family protein |