PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA48022.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | bHLH | ||||||||
Protein Properties | Length: 222aa MW: 24074.6 Da PI: 9.9091 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.4 | 8e-11 | 44 | 95 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r +h +Er+RR+ +N+ +e Lr+l+P++ + + a++ A+e++k+L+ PKA48022.1 44 QRLSHISVERNRRRLMNEHLEALRSLMPSS---FLHRGDQASVIAAAIEFVKQLE 95 699**************************9...8999****************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MESCITHSSF ANGRAGQSPA TERKKRKRGS ARKGVYAGAE AESQRLSHIS VERNRRRLMN 60 EHLEALRSLM PSSFLHRGDQ ASVIAAAIEF VKQLEQTLLL LKAEMTTRTA PAGAGEETLS 120 RAAMLVDGFL TSPQTVAQGH VNLKVAATRR AGQVATAIAA MDELRLTVLH LCITSLDAIT 180 VLYSFNLKME EDCRLGSADE VAAVVHQIFC SGKKAGKGDK RE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 23 | 28 | RKKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46810.1 | 1e-50 | bHLH family protein |