PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA47967.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | C2H2 | ||||||||
Protein Properties | Length: 312aa MW: 35877.8 Da PI: 6.0535 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.7 | 2e-05 | 56 | 80 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H PKA47967.1 56 YVCHfeGCGKKFLDSSKLKRHFLIH 80 9********************8877 PP | |||||||
2 | zf-C2H2 | 22.4 | 3.2e-07 | 86 | 110 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y Cp Cgk Fs nL+ H+rtH PKA47967.1 86 YICPyeGCGKAFSLDFNLRAHMRTH 110 89**********************9 PP | |||||||
3 | zf-C2H2 | 16.7 | 2.1e-05 | 116 | 140 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp dCgk++++ Lk+Hi+ H PKA47967.1 116 HVCPyeDCGKRYTHEFKLKTHIKAH 140 79*********************96 PP | |||||||
4 | zf-C2H2 | 12.4 | 0.00047 | 175 | 200 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y C+ C+k + + + L+ H+r+ H PKA47967.1 175 YACTyeGCSKAYIHEYKLNLHLRKeH 200 889999******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MLNALEQKKI EMEEQEVEPE PTTEVLFLCS YEGCGKIFVD VGALKKHAHI HGERQYVCHF 60 EGCGKKFLDS SKLKRHFLIH TGEKDYICPY EGCGKAFSLD FNLRAHMRTH SVENYHVCPY 120 EDCGKRYTHE FKLKTHIKAH HEKDTIKHVS AANKQHSTPK ASPAAYGSAS SDRPYACTYE 180 GCSKAYIHEY KLNLHLRKEH PGHISEENGK QVPSIDHVMD EASDQDVYLK KDSKGKNSKR 240 SKPASLQHMP PLKSVNRKVL SDVILRNPNN TKKPWPVKET YEEDSEETEE DREQSENDDD 300 DDDDDEETED ED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.2 | 1e-100 | C2H2 family protein |