PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA47832.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

HSF

Protein Properties

Length: 373aa MW: 40551.6 Da PI: 5.3439

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA47832.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.3	7.7e-36	41	131	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y+i+ed++++++isw+e+g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ F+kg+k+ll++i+ PKA47832.1 41 FLTKTYQIVEDPAVDDVISWNEDGSAFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANDCFRKGEKRLLCDIH 128 9***************************************************************99.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k PKA47832.1 129 RRK 131 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MNPLPAPSAA EQTAEQPLPS PSPSPSLPPA SEGQRALPTP FLTKTYQIVE DPAVDDVISW 60 NEDGSAFIVW RPAEFARDLL PKYFKHNNFS SFVRQLNTYG FRKIVPDRWE FANDCFRKGE 120 KRLLCDIHRR KIAPTAAVPA PAPAPPSAPA VRTGSPTNSV EQQVDQVLSP NSSPSASASA 180 PAAAGRGPPA TTGELIDENE RLRKENRQLS HELSQMKSLC NNIFALMSKY AASQQWQISG 240 GGGGGASAER LPEVLELLPA RRNPEEEVKP AAVSPWYPRL FGVSIGEKRV RGEEVEGDEE 300 LPPPPPPPSP PPPPPPPPAV EVKPELIEPG SESPVPAEAV DDRRPWVVYC PRPQRVCNGK 360 DRAFLERDGA HVS

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MNPLPAPSAA EQTAEQPLPS PSPSPSLPPA SEGQRALPTP FLTKTYQIVE DPAVDDVISW  60
NEDGSAFIVW RPAEFARDLL PKYFKHNNFS SFVRQLNTYG FRKIVPDRWE FANDCFRKGE  120
KRLLCDIHRR KIAPTAAVPA PAPAPPSAPA VRTGSPTNSV EQQVDQVLSP NSSPSASASA  180
PAAAGRGPPA TTGELIDENE RLRKENRQLS HELSQMKSLC NNIFALMSKY AASQQWQISG  240
GGGGGASAER LPEVLELLPA RRNPEEEVKP AAVSPWYPRL FGVSIGEKRV RGEEVEGDEE  300
LPPPPPPPSP PPPPPPPPAV EVKPELIEPG SESPVPAEAV DDRRPWVVYC PRPQRVCNGK  360
DRAFLERDGA HVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	2e-71	HSF family protein