PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA47793.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

GRF

Protein Properties

Length: 314aa MW: 34812.8 Da PI: 8.3898

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA47793.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.1	1.8e-24	90	134	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ PKA47793.1 90 DPEPGRCRRTDGKKWRCSKDAHPDSKYCERHMHRGRNRSRKHVES 134 79****************************************986 PP
2	QLQ	63.9	4e-22	28	63	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTaaQ+ +L++Q+l++Ky++a++PvPp+Ll++iq+ PKA47793.1 28 PFTAAQWRELEHQALIFKYMIAGVPVPPDLLLPIQR 63 9*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MSSTATPALA MGLMQSLAAS TEMGWLCPFT AAQWRELEHQ ALIFKYMIAG VPVPPDLLLP 60 IQRSFETSAS SSYHHYPSPG YFSYYGKKLD PEPGRCRRTD GKKWRCSKDA HPDSKYCERH 120 MHRGRNRSRK HVESTTNISC LQSESRSSSS TTTSIVASGS NGSFKNITLQ SGMAGVTKPQ 180 SGASLIGGNG CLDRAKIAAN EHNFFSSYPR SSLDGSWGPS FPITTRDSNE VTISSLPKKL 240 DLQHSYSRKE FDFSDHGKHK HQCLWPFNLP KARQSWIDLE DDQEQYSSAT QLSISVPLAS 300 SDFSTTTSCS PYDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-41	GRF family protein