PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA47734.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MYB_related | ||||||||
Protein Properties | Length: 308aa MW: 35302.1 Da PI: 6.0946 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.1 | 1e-13 | 49 | 90 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 + +++E+ +++ ++++G++ W+ I+r+++ gRt++++k++w++ PKA47734.1 49 PISPDEETMIIRFHAMFGNK-WSMISRYLP-GRTDNEIKNYWNT 90 679*****************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence |
MDQVLLEYLA KNNTKNWVTI AKNSGLQRDS RSCRFRWVTH LDPHLKKEPI SPDEETMIIR 60 FHAMFGNKWS MISRYLPGRT DNEIKNYWNT RIKRCKKSAQ PLYPPDIQCR VLNQSNRSPL 120 APLVPPAGEV LLIALHQIQS VLPLTSSSDV STHLPPFLSL PLNDNMDFQV NHNNNDQFQF 180 CNWSEFDSLQ LPPLDLLSPD PHHSKSAFAN SQEQGIYEEE TLDAQLLNWQ RSYAYVVEDL 240 LAIDSPIQTN NSFGYFPKNQ VNKEILPTNQ KTMTMITREV EQGKIPGSPD QLELLSLSPL 300 DPFAIFLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G32460.1 | 3e-38 | MYB family protein |