PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA47254.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 315aa MW: 34521 Da PI: 6.776

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA47254.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.2	4.6e-51	11	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtd+el+++yL kkv+++ ++ +i+e+d+yk++PwdLp k+ +e ew+fFs+rd+ky++g r+nrat+sgyWkatg+dk++l++ +++ PKA47254.1 11 LPPGFRFHPTDQELINCYLSKKVAASLPAASAIIAEIDLYKFDPWDLPGKAFFGEGEWFFFSPRDRKYPNGARPNRATASGYWKATGTDKPILAAdGTH 109 79*********************99999889***********77667899*********************************995666 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 g+kk Lvfy+gr pkg+kt+Wvmheyrl PKA47254.1 110 CLGVKKALVFYTGRPPKGVKTEWVMHEYRL 139 79************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MDSPGLLNSQ LPPGFRFHPT DQELINCYLS KKVAASLPAA SAIIAEIDLY KFDPWDLPGK 60 AFFGEGEWFF FSPRDRKYPN GARPNRATAS GYWKATGTDK PILAADGTHC LGVKKALVFY 120 TGRPPKGVKT EWVMHEYRLL DSVSPVHPQK QPNGSMRLDD WVLCRVRQKG GSPAESKIPS 180 SPLSLFTNNA CELEEKNPIA TPANWSDQQL LVYLLGSCES SGESSDPGSL TSPEHGCWSY 240 SGVHPAAVGP AAPPPQPPYV DSGLSSIKRN LSFSMLDELM ITQPGDYKRL QRSAGGQPSP 300 AVSFSVNQWL EDFFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	4e-71	NAC family protein