PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA47200.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family TCP
Protein Properties Length: 284aa    MW: 31076.9 Da    PI: 8.4563
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA47200.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP104.41.8e-3287159266
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........s 66 
                 +g+kdrhsk+ T++g RdRRvRlsa +a +f+d+qd+LGfd++sk++ WL+++akpai+ l+++        +
  PKA47200.1  87 TGRKDRHSKVLTAKGVRDRRVRLSARTAVEFYDVQDRLGFDRPSKAVSWLIENAKPAIDRLAQLdplpqftlN 159
                 79*************************************************************9555555431 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MSESSCQIFK AEQKGGRAEL AMALLEFDAK AFLTTGGRRR PAQLLLINQL ELQAPSSEEK  60
MGDAQQFRRR PAGEAGEEQI GRIVRSTGRK DRHSKVLTAK GVRDRRVRLS ARTAVEFYDV  120
QDRLGFDRPS KAVSWLIENA KPAIDRLAQL DPLPQFTLNP PAAAAGEKSV NAFEDLIIAP  180
GHQLLFTGDG DGGGDRGYQY GTAAQSQFFA QRGTLQSSYP AWVPAASDHY MTEDRRSSSS  240
AVLTAVVSGA AGVGFSGFHI PARMQEMEDE NLLLPPRHSW KESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53230.11e-35TCP family protein