PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA47097.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

Dof

Protein Properties

Length: 404aa MW: 44007.8 Da PI: 7.7067

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA47097.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.8	2.7e-39	98	157	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+st+tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrk+k+s PKA47097.1 98 PDKILPCPRCNSTDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGSMRNVPVGAGRRKSKSS 157 7899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MAECKDTSIK LFGKTIQILM AAGDAGGDEV EKASSNKETE EKSEAGDTSP EAEKNEPNRS 60 TDKENTEPSP SANKISKGDD RKNEAAGNSP QDKAHRKPDK ILPCPRCNST DTKFCYFNNY 120 NVNQPRHFCK NCQRYWTAGG SMRNVPVGAG RRKSKSSAAN LQYRHFTIPN CGHPDLPEPV 180 HQMGQPLNFN GTLLSFGSDS PLCESMASAL NLMERTMKKR GRNGFHQSEI GEEQSSGSSV 240 TASNSNDEDN GLPNSKAQRL HPNLPHFNGT PWPYPWSHPP PFFPFYPVTA YWGIPLLSPP 300 ISTSPSACSS CLGSSSPTSG KHSGEGNDST EHDLWIPKTL RIDDPEKSAK CSVWATLGFK 360 HHKAGPIAGD HMARSAEASQ VLQANPAALS RSISFQESSK CVFN

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MAECKDTSIK LFGKTIQILM AAGDAGGDEV EKASSNKETE EKSEAGDTSP EAEKNEPNRS  60
TDKENTEPSP SANKISKGDD RKNEAAGNSP QDKAHRKPDK ILPCPRCNST DTKFCYFNNY  120
NVNQPRHFCK NCQRYWTAGG SMRNVPVGAG RRKSKSSAAN LQYRHFTIPN CGHPDLPEPV  180
HQMGQPLNFN GTLLSFGSDS PLCESMASAL NLMERTMKKR GRNGFHQSEI GEEQSSGSSV  240
TASNSNDEDN GLPNSKAQRL HPNLPHFNGT PWPYPWSHPP PFFPFYPVTA YWGIPLLSPP  300
ISTSPSACSS CLGSSSPTSG KHSGEGNDST EHDLWIPKTL RIDDPEKSAK CSVWATLGFK  360
HHKAGPIAGD HMARSAEASQ VLQANPAALS RSISFQESSK CVFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	4e-48	Dof family protein