PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA46980.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | C2H2 | ||||||||
Protein Properties | Length: 493aa MW: 55274.3 Da PI: 5.8825 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 21 | 8.5e-07 | 250 | 271 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H PKA46980.1 250 FCSICGKGFKRDANLRMHMRGH 271 6*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 493 aa Download sequence |
MDHKRTMSND VLASSCSFAG DQPRHLSRSQ PSQQMCSKSF NVDDQTEQSW LESLPPEYPQ 60 SLSLNCSINQ IVKNATSDWD AKIMLNNLSF LEQKIHQVQD IVRSIICQKS VTSPQPNDLA 120 VRQQLLTTDL TSIIVDLIST AGNLLPSIKN NILSTNPPPE ELYSHFVSST ISKPDAILPK 180 SEELPLEKEK DVSDDEELMK SVVDCSGKLY DSLHNEDHDI KDIEDCTEAD GSYEVLQLEK 240 EEILAPHTHF CSICGKGFKR DANLRMHMRG HGDEYKTPAA LAKPSKDLEP AIIKRYSCPF 300 VGCKRNKEHR SFQPLKTLLC VKNHYKRSHC EKSYICSRCH TKKFSVLADL KTHEKHCGRD 360 KWLCSCGTTF SRKDKLFGHV ALFQGHTPAL TADEDCVLAT LEHGNGKELG IEAEANRCDL 420 TSDSLNDVLD TKIFDDDRTY LSALSFEPND YGVTDEFMKV AFGLLENSSS LYPPGHFDFV 480 QKYGGNPGSG SFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34370.2 | 1e-136 | C2H2 family protein |