PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA46963.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

FAR1

Protein Properties

Length: 818aa MW: 94337.1 Da PI: 7.8465

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA46963.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.6	7.4e-22	36	120	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY+ YA+++GF vrk+ k++ ng+++ rtf+C+keg+ ++ k+ +++r+ rtgC a++ v++ +dgk++v++++ HnHel+ PKA46963.1 36 QFYCYYARQIGFGVRKHLVKRR-SNGTVYARTFCCYKEGFCRTVKEG----KKPRPDARTGCGAHISVRLLDDGKFHVNEFDPVHNHELV 120 6***********99876665.8999**********998776....99*********************************97 PP
2	FAR1	75.8	8.5e-24	197	288	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA +vGFsvrk+ k+ +++g +++rt+vC keg++++++++ +++ r +++ +rtgC a+l++k +k+g+++vt++e +HnH+l+ PKA46963.1 197 EFYISYAARVGFSVRKHLVKR-RTSGLVYSRTYVCHKEGQSRRNSDQkkdQQHVRGPKPYDRTGCLASLTIKITKNGRYRVTEFEPKHNHPLV 288 6***********9987666.59999********9887766634355556699*******************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 818 aa Download sequence
MSQPEQQAAS SSGEASEESW VPKLDMVFES DEKAYQFYCY YARQIGFGVR KHLVKRRSNG 60 TVYARTFCCY KEGFCRTVKE GKKPRPDART GCGAHISVRL LDDGKFHVNE FDPVHNHELV 120 RMVSDVKLES NNDSGGAGKV RKRYLGAQIT RRLVFNNYVP SNGVDSSFLG SECTELSGEE 180 WVPKVDMEFE DDDEAYEFYI SYAARVGFSV RKHLVKRRTS GLVYSRTYVC HKEGQSRRNS 240 DQKKDQQHVR GPKPYDRTGC LASLTIKITK NGRYRVTEFE PKHNHPLVIP SKAHLFRWRW 300 RRGLVGAQAE FLDSGDGQLN FSESCDQGNE VDGIDTNSRL LFAGYKNYIP SKRMNDMLPG 360 DVGAVMQYVQ EKQAADPSFY YALLLDRNDM LTCIFWVDAK SMVDFEYFGD VVCFDTTYRC 420 RDYGRPFAPF IGVNNHKQSV IFGAAFLYDE TEESFKWLFE TFRTAMSGKQ PVVVLTDRGQ 480 GISNAIAAVW PGTIHRVCVW QMFNNALKHL NFVFQGSSTF AKDFSHCIYD IEDEEDFVSE 540 WKVMVEKYDL ASNSWLAKLY EDREKWSLAY GRETFCADIK ISLIKESISC KLKQHLCLQH 600 KLLDFFKHYE NLLDEKRNAE LQADYRAGHS SSKMPASRML RQAANLYTPS VFKIFQSEFE 660 LSMDLMVYNC DHVETTLIYK VTTEDCKKEY IVRFDTRENT VICSCRKFDL MGIQCRHVLK 720 VLDIINIKEL PPQYILKRWT KDAKSGNLRG NHEIEIGDEN KSSLGKRCSR LRYICNMIAI 780 RAAETLESYA FVQTQSNELM DQVCQILKRA PPDRPQAN

Sequence ? help Back to Top

Protein Sequence Length: 818 aa Download sequence

MSQPEQQAAS SSGEASEESW VPKLDMVFES DEKAYQFYCY YARQIGFGVR KHLVKRRSNG  60
TVYARTFCCY KEGFCRTVKE GKKPRPDART GCGAHISVRL LDDGKFHVNE FDPVHNHELV  120
RMVSDVKLES NNDSGGAGKV RKRYLGAQIT RRLVFNNYVP SNGVDSSFLG SECTELSGEE  180
WVPKVDMEFE DDDEAYEFYI SYAARVGFSV RKHLVKRRTS GLVYSRTYVC HKEGQSRRNS  240
DQKKDQQHVR GPKPYDRTGC LASLTIKITK NGRYRVTEFE PKHNHPLVIP SKAHLFRWRW  300
RRGLVGAQAE FLDSGDGQLN FSESCDQGNE VDGIDTNSRL LFAGYKNYIP SKRMNDMLPG  360
DVGAVMQYVQ EKQAADPSFY YALLLDRNDM LTCIFWVDAK SMVDFEYFGD VVCFDTTYRC  420
RDYGRPFAPF IGVNNHKQSV IFGAAFLYDE TEESFKWLFE TFRTAMSGKQ PVVVLTDRGQ  480
GISNAIAAVW PGTIHRVCVW QMFNNALKHL NFVFQGSSTF AKDFSHCIYD IEDEEDFVSE  540
WKVMVEKYDL ASNSWLAKLY EDREKWSLAY GRETFCADIK ISLIKESISC KLKQHLCLQH  600
KLLDFFKHYE NLLDEKRNAE LQADYRAGHS SSKMPASRML RQAANLYTPS VFKIFQSEFE  660
LSMDLMVYNC DHVETTLIYK VTTEDCKKEY IVRFDTRENT VICSCRKFDL MGIQCRHVLK  720
VLDIINIKEL PPQYILKRWT KDAKSGNLRG NHEIEIGDEN KSSLGKRCSR LRYICNMIAI  780
RAAETLESYA FVQTQSNELM DQVCQILKRA PPDRPQAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-108	FAR1 family protein