PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA46684.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 169aa MW: 18302.1 Da PI: 10.2823 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65 | 1.6e-20 | 8 | 57 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrd ++ + r++lg+f+t+eeAa a+++a+++l+g PKA46684.1 8 HFRGVRKRP-WGRYAAEIRDpWK----KSRVWLGTFDTPEEAAFAYDQAARALRG 57 69*******.**********883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MGSRGDVHFR GVRKRPWGRY AAEIRDPWKK SRVWLGTFDT PEEAAFAYDQ AARALRGPKA 60 KTNFPSSPPF LPSLPPPPPP PPQPPPPPRL PLDLNQLPCR LWPHPTSLPL PPPPPPPPPS 120 TAFLLGSFLC RDPPASDPYA AVAPRGLPFD LNEPPPPPPP PSAAAPASF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28360.1 | 2e-32 | ERF family protein |