PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA46475.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 762aa    MW: 82952.1 Da    PI: 6.3711
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA46475.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS314.91.8e-963887611374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...........sseelaalklfsev 87 
                 lv++L+++Ae v++g++  a+++Larl+++  sp g p+ R a+yf++AL+  la+s++  + + +ps+ ++++           ++ +l+a+k+fsev
  PKA46475.1 388 LVDQLFKAAELVEAGNFVIAHEILARLNQQlPSPLGMPLLRSAFYFKQALQLLLANSSNPPAVTTSPSHRHHRTpfitslitpldVVLKLSAYKAFSEV 486
                 6899************************998*************************6655555555555555556899999999889999999****** PP

        GRAS  88 sPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpeg.ppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185
                 sP+l f+++ta qa+lea++++e++HiiDfdi+ G+QW +++q+La+R+++  p l++T+++s  +++  el+ t+e+L++fA++l++pfe+n+l ++ 
  PKA46475.1 487 SPLLHFANFTATQALLEALDTAEQIHIIDFDIGVGGQWSSFMQELAQRRSPaIPLLKLTAFVSLGAFHDLELHLTRENLSHFASSLNIPFEINILSTEY 585
                 **********************************************99966268*********9999****************************9999 PP

        GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                 ++  e+ +L+ +++E++aVnl + + +++    s     +++L+lvk+l Pk+++ ++q +d+++ +F ++f++a++  ++l+ds++a  ++  + ++k
  PKA46475.1 586 FDPAEILTLSSSRNETIAVNLPVGVGHTP----S----FSTLLRLVKQLLPKIIISMDQGSDRSDLPFSQHFIHAFQSSMVLLDSIDAA-GTSPDMANK 675
                 *************************9999....3....557*********************************************998.566699*** PP

        GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +Er++l+++i+n++  ++++     e+   Wr+ + +aGF p++ls+++++qa++ll++++++g++ve+++ sl+l+W++ +LvsvSaWr
  PKA46475.1 676 IERFVLQPRIENCIFGRHRA----AEKTPPWRAIFASAGFVPLQLSNFTETQAECLLKRIQVRGFHVEKRQSSLYLYWQRGELVSVSAWR 761
                 ***************99998....9999*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 762 aa     Download sequence    
MRVVPFHIPV KGGLEAVAAQ VIGAGEEEEG DIFWSGSPHT RKVREVLEPT SVLDQRRSAS  60
PPTSTSTLSS SFGGGGVSTD TAGVAAISED PCHRWPGSDS APSSDSDGRK KQRAADLQPV  120
SYLLDMSGLA GVEKCGIRAD DWETMLSAST ASPSQEQTFL RWIMGDIEDP SAAKLYQQQL  180
LVSSSQGPPV EFDAGVVDPG FGIEPLCGIT GAAPFSGSGS AIGIASLASS GWFSQVASTS  240
NRTTPGNSMP CPSETVMSSL PPLTLPPAKC FPQQPETSNE KSQPFPPNLL FNPQQQTHTM  300
APAFFLPIPS FTLCAPEQHQ NPNAFLTPHP KRPNSMPTDT AFQLNAAGAS PEIFLRRNHL  360
QSQPHPNQSI SLAPFHNGPY HLLQQQALVD QLFKAAELVE AGNFVIAHEI LARLNQQLPS  420
PLGMPLLRSA FYFKQALQLL LANSSNPPAV TTSPSHRHHR TPFITSLITP LDVVLKLSAY  480
KAFSEVSPLL HFANFTATQA LLEALDTAEQ IHIIDFDIGV GGQWSSFMQE LAQRRSPAIP  540
LLKLTAFVSL GAFHDLELHL TRENLSHFAS SLNIPFEINI LSTEYFDPAE ILTLSSSRNE  600
TIAVNLPVGV GHTPSFSTLL RLVKQLLPKI IISMDQGSDR SDLPFSQHFI HAFQSSMVLL  660
DSIDAAGTSP DMANKIERFV LQPRIENCIF GRHRAAEKTP PWRAIFASAG FVPLQLSNFT  720
ETQAECLLKR IQVRGFHVEK RQSSLYLYWQ RGELVSVSAW RC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-104GRAS family protein