PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA46380.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 524aa MW: 58574.4 Da PI: 7.0325 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 426.8 | 1.7e-130 | 154 | 523 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 ++lL+ecAea+++g + ++l+++ +e++s +gdp+qR+ ay++e+L ar +s++++y+al++++ + +s+e l++++++++++P++kf++++aN PKA46380.1 154 KHLLTECAEALDEGRIADFESLVKETREHVSINGDPIQRVGAYMLEGLVARHESSGTNIYRALRCRQPP--ESKELLSYMRILYDICPYFKFGYMAANG 250 79******************************************************************9..599************************* PP GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197 aI ea+ +e+r+HiiDf+i qG+QW++L+qaLa+Rp+gpp +RiTg+++p+s+ + + l+ +g L+++ +++ +p+ef+ l + +++ e+L++k PKA46380.1 251 AIAEAIRSEDRIHIIDFQIAQGTQWVTLIQALAARPGGPPLVRITGIDDPDSKyaRGTGLQLVGGMLSEMSKKFCIPLEFKGL-SVYGPQVTREMLEIK 348 ***************************************************999999*************************5.88899********** PP GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296 pgEalaVn+ lqlh+++desv+++++rd +L++vk+lsPkvv+vveqe+++n+++Fl+rf+e+++yysa+f+s++++l+r+s+er+ vE+++l+++ivn PKA46380.1 349 PGEALAVNFTLQLHHTPDESVDVNNPRDGLLRMVKGLSPKVVTVVEQESNTNTAPFLTRFAETFDYYSAMFESIDVTLHRKSRERVGVEQHCLAKDIVN 447 *************************************************************************************************** PP GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 v+aceg+er+erhe l+kWr+rl++aGF+p pls+++++ +k+ll ++++ y++ e++g+++lgW++r+L+s+SaW PKA46380.1 448 VIACEGKERIERHELLGKWRSRLTMAGFRPFPLSSYVNSVIKTLLGYYSNK-YTLVEKDGAMLLGWSNRNLISASAW 523 **********************************************99966.************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 524 aa Download sequence |
MDSHKRHRYG FKLTGADHIS YRFPSANPLC SASTAVSLKP DLGNSPISPL SSQFDCESSL 60 PSLTQEQHSS TDTETRANIA EGYAVCSQIS MRHVLQEIES VLMAPDSNEA ASSSRGRKQK 120 NRRKEPESAY HQHQHPENRH GEATGEAFPC VDIKHLLTEC AEALDEGRIA DFESLVKETR 180 EHVSINGDPI QRVGAYMLEG LVARHESSGT NIYRALRCRQ PPESKELLSY MRILYDICPY 240 FKFGYMAANG AIAEAIRSED RIHIIDFQIA QGTQWVTLIQ ALAARPGGPP LVRITGIDDP 300 DSKYARGTGL QLVGGMLSEM SKKFCIPLEF KGLSVYGPQV TREMLEIKPG EALAVNFTLQ 360 LHHTPDESVD VNNPRDGLLR MVKGLSPKVV TVVEQESNTN TAPFLTRFAE TFDYYSAMFE 420 SIDVTLHRKS RERVGVEQHC LAKDIVNVIA CEGKERIERH ELLGKWRSRL TMAGFRPFPL 480 SSYVNSVIKT LLGYYSNKYT LVEKDGAMLL GWSNRNLISA SAWH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 117 | 125 | RKQKNRRKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 1e-176 | GRAS family protein |