PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA46122.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 268aa    MW: 30100.9 Da    PI: 6.3113
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA46122.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.84e-057193123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ Cg+ F++   L  H+++H
  PKA46122.1 71 YSCSFCGRDFRSAQALGGHMNVH 93
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MHSAMEQAKF WMWTRRRFPA MPLFDPASPA ISPVSIRAAA STLYNESWEE KAFAEDAAGL  60
LGGCVWPPRS YSCSFCGRDF RSAQALGGHM NVHRRDRARL KQSSVGGEEE EDHEDEVNHR  120
DLMMNISSSV APNHVGHKLV CINGNPNPNS GVASPLVLFN YGQLRDEEAL SQSQRCTTTV  180
KELKFGGEYL KLAGEVNCVS KRVFDEDEEN QSVCSKRRRV MNPTSILIST LEKTKLKESE  240
AEVINQCQDH IQDLDLELRL GDLPKVKY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1216220KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06070.17e-27C2H2 family protein