PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA45727.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family E2F/DP
Protein Properties Length: 302aa    MW: 33930.7 Da    PI: 6.8632
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA45727.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP73.62.1e-2374150471
     E2F_TDP   4 ksLrlltqkflklleksee.givtlnevakeLvse............dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 ++Lr +++    +++k+++ g++t+neva+e++++            d+kn+rRR+YD++NVL a+n+i k +k+eirw+g
  PKA45727.1  74 WGLRRFSKI---VCQKVQAkGRTTYNEVADEIIADlatldkasefefDEKNIRRRVYDAFNVLLAINVIIK-DKKEIRWMG 150
                 79*******...******99***************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MEADRCTGLE SEIDKEEIRT ANHTHSLGEN GNALVPTPCD GILKLNDACA EDGNYVVPES  60
ADRNRKKVSR IVGWGLRRFS KIVCQKVQAK GRTTYNEVAD EIIADLATLD KASEFEFDEK  120
NIRRRVYDAF NVLLAINVII KDKKEIRWMG FPNTSTKSLE DLKKERMNLM IKIQEKTNYL  180
KELEAKATDL RNLVQRNQHL CGSGKGSSEG VALPFLLVQT NPEATVEIEI SSDMQLVHFD  240
FNGTPFSLHD EAAVLKMMRC PHSTPANLFT HSRTPASKCI KDEGGKLIRP PSFSWSSESL  300
TM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.16e-79E2F/DP family protein