PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA45610.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 460aa    MW: 49059.5 Da    PI: 6.3256
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA45610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3412.1e-104834452374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +lLl+cAeavs ++l++a+ lL ++selasp g++ +R+aayf+ AL+ar++ s  + y+ lp ++       +   a++lf+ +sP++kfsh+t Nq
  PKA45610.1  83 LSLLLQCAEAVSMDHLSAARDLLPEISELASPFGSSPERVAAYFADALNARILCSFLGAYSPLPLQPR----LHRISRAFQLFNSISPLVKFSHFTSNQ 177
                 689*********************************************************99998888....6888899******************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp. 198
                 aI e ++  +rvHi+D+di+qGlQWp L++ LasRp++  s+RiTgvg+      e le+tg+rLa+fA+ lg+pfefn++  k  e  +le Lr +  
  PKA45610.1 178 AIFETLNPFDRVHIVDLDIMQGLQWPGLFHILASRPHPIQSVRITGVGP----AGELLEATGRRLADFAAGLGLPFEFNPIEGKIGEIANLEPLRARDa 272
                 *************************************************....99*************************888888888*******999 PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.....eerikvErellgr 292
                 gEa++V++    h l+d ++s       +  +++s++P++v++veq++ h +++Fl rf+eal+yysalfd++  ++ +++     eer  vEr llg 
  PKA45610.1 273 GEATVVHWTQ--HCLYDVTGSDVA----TAGVLRSIRPRLVTIVEQDLGH-GGDFLGRFVEALHYYSALFDAVGDGATAAAgcaggEERWEVERGLLGG 364
                 ********99..888877888777....888999****************.789*******************5554444457889************* PP

        GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 ei+n+va  g +r+ + + +e+W + l+++GF+pv+l  + a+qa+lll +v+++gy++ ee g l lgWkd +L+++SaW+
  PKA45610.1 365 EIRNIVAVGGPKRTGEVR-VERWGDELRRVGFRPVSLAGSPAAQANLLLGMVPWKGYTLVEEGGRLKLGWKDLSLLTASAWQ 445
                 ************998887.9*************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    
MLQSLLPRPP INAASSSSDA PPATTAAMRP TNKRSSPSSS DNPPLKKPHH SPLPSSATAS  60
GAASGSSSAE DSPEHESRGL RLLSLLLQCA EAVSMDHLSA ARDLLPEISE LASPFGSSPE  120
RVAAYFADAL NARILCSFLG AYSPLPLQPR LHRISRAFQL FNSISPLVKF SHFTSNQAIF  180
ETLNPFDRVH IVDLDIMQGL QWPGLFHILA SRPHPIQSVR ITGVGPAGEL LEATGRRLAD  240
FAAGLGLPFE FNPIEGKIGE IANLEPLRAR DAGEATVVHW TQHCLYDVTG SDVATAGVLR  300
SIRPRLVTIV EQDLGHGGDF LGRFVEALHY YSALFDAVGD GATAAAGCAG GEERWEVERG  360
LLGGEIRNIV AVGGPKRTGE VRVERWGDEL RRVGFRPVSL AGSPAAQANL LLGMVPWKGY  420
TLVEEGGRLK LGWKDLSLLT ASAWQPTDAG GWDGTEGVSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.11e-149GRAS family protein