PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN27197.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 414aa    MW: 46066.4 Da    PI: 7.1782
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN27197.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS337.72.1e-103314101374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lLl+cA++ +sg+l+ a+++L+++sel+s +gd+mqRlaa f+ ALaarl++ +++lykal+        s +   a ++f+ v+P+l fs+ + N
  PIN27197.1  31 LIHLLLTCANHAASGNLHHADECLCQISELSSISGDSMQRLAARFAAALAARLVKRWPGLYKALNNGGRV---SFDIDYAKSVFFRVFPYLGFSYAIIN 126
                 689*************************************************************998886...5555566677**************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 + + +a+ ge+ +H+i +d s ++ W+++++a a+ p+gppsl+iT vg     s e+ e +g +L k Ae+l++p+efn  v+  l +++l++L+v++
  PIN27197.1 127 RVLIQAMLGERVIHVINLDSSDPGLWVPFIRAVANGPDGPPSLKITCVGG----SMEAQEMLGLKLMKEAESLNMPLEFNH-VHVGLREVTLDMLKVQS 220
                 **************************************************....99*************************.7999************* PP

        GRAS 199 gEalaVnlvlqlhrll..............desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.eer 282
                 gEala  ++l lh ll              +++v+  ++++++Lk+vks+ Pk + +v+qe+++ns+++++rf+e l++ysalfds+++ ++  s ++r
  PIN27197.1 221 GEALALVSILGLHVLLaeddrvdvhfglskNKEVKECKPIKDFLKMVKSIGPKAFLLVHQESNLNSSRLVDRFVEGLHFYSALFDSIDVAFGGVScSDR 319
                 ****************************997788888899*****************************************************998999 PP

        GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 + +E++ +g+ei+n+va+eg er+erhe+++kW  r+++aGF+p+++ ++++++a+  ++ ++  gyr+ +e+gsl+++W+drp+++vSaW+
  PIN27197.1 320 TILEEM-IGKEIENIVAMEGMERTERHERYAKWAVRFSRAGFRPIRMWHETMEDAQKAVESYGPGGYRIISEKGSLMICWHDRPIYAVSAWT 410
                 999999.********************************************************99**************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    
MSSSQKLDVS LSLSLPPTND VLKPQERGVK LIHLLLTCAN HAASGNLHHA DECLCQISEL  60
SSISGDSMQR LAARFAAALA ARLVKRWPGL YKALNNGGRV SFDIDYAKSV FFRVFPYLGF  120
SYAIINRVLI QAMLGERVIH VINLDSSDPG LWVPFIRAVA NGPDGPPSLK ITCVGGSMEA  180
QEMLGLKLMK EAESLNMPLE FNHVHVGLRE VTLDMLKVQS GEALALVSIL GLHVLLAEDD  240
RVDVHFGLSK NKEVKECKPI KDFLKMVKSI GPKAFLLVHQ ESNLNSSRLV DRFVEGLHFY  300
SALFDSIDVA FGGVSCSDRT ILEEMIGKEI ENIVAMEGME RTERHERYAK WAVRFSRAGF  360
RPIRMWHETM EDAQKAVESY GPGGYRIISE KGSLMICWHD RPIYAVSAWT CFGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.14e-99GRAS family protein