PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN27174.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 287aa MW: 32595.5 Da PI: 5.4539 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.5 | 2.1e-15 | 19 | 66 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ G g+W+ Iar g+ R++k+c++rw +yl PIN27174.1 19 KGLWSPEEDEKLMRYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYL 66 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.4 | 1.2e-16 | 72 | 115 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+e++v+++ lG++ W+ Ia++++ gRt++++k++w++ PIN27174.1 72 RGAFSPQEEEIIVHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNS 115 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
MRKPDKKKDN LNNKVKLRKG LWSPEEDEKL MRYMLTNGQG CWSDIARNAG LQRCGKSCRL 60 RWINYLRPDL KRGAFSPQEE EIIVHLHSIL GNRWSQIAAR LPGRTDNEIK NFWNSTIKKM 120 LKNNKSPTKI TNHSYNIPTN NNPSSELEGI NTTFMQENDI VCMDSSNFSN PFNPTADYNS 180 NIFDVSNMAS ADSLMFRDVM GLENDISIPG LEVIRGADGD NCGVYNEYVL DKKNGGLNIN 240 NSSSESINVG VGNHSWQEES FKMGEYLDWE GLLDNVSSLP YLDIQVE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12870.1 | 2e-66 | MYB family protein |