PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN27127.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 320aa    MW: 35240.9 Da    PI: 5.245
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN27127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.78.8e-1380131155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++++h  +Er+RR+++N+ ++ Lr+l+P     + k+ + a+i   +v+YI++Lq
  PIN27127.1  80 QKVSHITVERNRRKQMNENLSVLRSLMPCF---YVKRGDQASIIGGVVNYINELQ 131
                 6899*************************9...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MDSENISEFL EDDIFSILDA LETASDYNNP QESFEFQKSA YSPLNAFQES ETEVEAASPK  60
CKKQKLNSAA ASASHEEGQQ KVSHITVERN RRKQMNENLS VLRSLMPCFY VKRGDQASII  120
GGVVNYINEL QQVLQSLEAK KQRKAAYTEI ILSPRLSSPR PSLSPLSPRK PPLSPRLSLP  180
ISPSTPQPSS PYKPMMHNLQ TGFLNSPSLS SPVDLSPCNS STNSSINDCV NELVACSKSA  240
VAEVEVKFSG PNLVLKTVSH RIPGQAVKIV SALEELALEI LQVNINTVDE RMLNSFTIKI  300
GIECQLSAEE LAQQIQQTFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.12e-47bHLH family protein