PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26962.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 338aa    MW: 38284.6 Da    PI: 5.4949
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26962.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.81.6e-07250290954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P        K++ a++L +A +Y+k L
  PIN26962.1 250 ARHRRERISERIRVLQKLVPGG-----SKMDTASMLDEAANYLKFL 290
                 599*****************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MENLDWTNQE FEESFLYSNG RIVDDQQVQK TELIPNFIPH WNSRSESNSR WGLVTNAEML  60
SNPVVNTQNS FILEPGIITI PQTNTQQMKP VISTNTGSLE SIDCLLSNSN SQTDTTSVED  120
DGISMIFSDC RSLWNFTNPV DDYKPSYTTT TKRKRTEEDQ YTEAFRTKQQ NLEPGPKRAH  180
PGPVSSNINF QQPSSSASSA DEPDAEAIAQ MKEMIYRAAA FRPVNFGVEA VEKPKRKNVR  240
ISNDPQTVAA RHRRERISER IRVLQKLVPG GSKMDTASML DEAANYLKFL RSQVKELEAL  300
GQKIDHSNGN IGFSPYVNYF FTMQQPQFSI QNPNPKSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.18e-47bHLH family protein