PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN26872.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | WRKY | ||||||||
Protein Properties | Length: 190aa MW: 21805.5 Da PI: 9.1009 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.9 | 5.9e-30 | 109 | 167 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYG+K+vk+s++pr+Y++C+s gC+vkk+ver++ed ++v++tYeg Hnhe PIN26872.1 109 MDDGFKWRKYGKKVVKSSPNPRNYFKCSSGGCNVKKRVERDREDSSYVITTYEGIHNHE 167 59********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MDTSPQFEKF PNPNPNLGHQ FPYATHHQHN DLLYFHDISN YLMSDEGLEG KALLQAQGAL 60 RNTTMSFSDE SSISTPSAYN IKCGSKVKKY KTHKDFRFAF RTKSDLEFMD DGFKWRKYGK 120 KVVKSSPNPR NYFKCSSGGC NVKKRVERDR EDSSYVITTY EGIHNHETPT TPCVVYCTPK 180 PHSLSHASFM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 5e-36 | WRKY family protein |