PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26839.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 336aa    MW: 35729.7 Da    PI: 4.9582
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26839.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.33e-21120169255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae+Aa+a+++a+++++g
  PIN26839.1 120 RYRGVRQRP-WGKWAAEIRDPY----KaARVWLGTFDTAEDAARAYDEAALRFRG 169
                 7********.**********76....35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MLSGLDREQE MSAMVSALTR VVAGDVSDAA VEGGTATGGG GGSGGAGGSS SSSSSSASKR  60
GRDEQSTDFS IGSSNLEASL ATHPSIVRPS IITSAQASTY AYTPTYNQEN TREPSRINRR  120
YRGVRQRPWG KWAAEIRDPY KAARVWLGTF DTAEDAARAY DEAALRFRGS KAKLNFPENV  180
RLVHPNPSST ENYHSSRSEI VAVSTASEPI VHSQVQFQRQ DSEPIVHSQV QFQRQDSEVD  240
VMNYTLDDIE REEGGSSSRL LDGLMGYPSG YPRGLESYTL PVSSVSPVSS VDPVFYPVAQ  300
QPQDIEGSQS SGGGGSGGGG GAGFSWEDSG HQTRSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.12e-28ERF family protein