PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN26777.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 219aa MW: 24708.7 Da PI: 9.5746 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50 | 7e-16 | 15 | 61 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+WT++Ed++l++ +k +G g+W+ ++ g+ R++k+c++rw++yl PIN26777.1 15 GAWTKQEDDKLIHHIKIHGEGSWSNLPKAAGLQRCGKSCRLRWLNYL 61 89*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 48 | 2.9e-15 | 68 | 111 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g+++ E++ll++++++lG++ W++Ia +++ gRt++++k++w+++ PIN26777.1 68 GNFSIAEEDLLIKLHALLGNR-WSLIAGRLP-GRTDNEVKDYWNSH 111 688999***************.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MRNPCSEEKR RIKTGAWTKQ EDDKLIHHIK IHGEGSWSNL PKAAGLQRCG KSCRLRWLNY 60 LRPDSKGGNF SIAEEDLLIK LHALLGNRWS LIAGRLPGRT DNEVKDYWNS HIKRKLTNMG 120 IDPNNHRVDQ TLLSSCSKIS KDDAKLSHVS RINPSKNLSK HRSINDCDQT SDSTSSINGE 180 DEEVSSSDLN LDLTIRFPPS SFSSSSGSRF KVVENRVDI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 1e-67 | MYB family protein |