PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN26679.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 473aa MW: 55152.4 Da PI: 9.6475

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN26679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.7	1.6e-07	95	127	57	89
FAR1 57 etrtgCkaklkvkkekdgkwevtkleleHnHel 89 + +t+Cka+ + +ek+++w+vt++ eHnHe+ PIN26679.1 95 TIKTKCKARPGIGQEKEEEWKVTRFIMEHNHEM 127 569****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MKLIIFVNSQ VCHYWVQSIS SIIDEVDSRL AVGQVVKSVE DAYFLGGSGC NLPYFLYCDY 60 AHAKGFSIRK GDQPYFPCSN ELQAKEFECS CRGPTIKTKC KARPGIGQEK EEEWKVTRFI 120 MEHNHEMGEV DQTYLLRSSQ AIVNVGISVA SAVSYMEKKA HGPENLRFTR KDAYDYIRSL 180 KKHRKIENGD ASKLIKYFLN KSNNEPYFYW DMQLDDDNRV MNFFFRDYRC RIDYESFGDV 240 LSQNVMFGLA FMSDEKESFE WLFRTFLESM SGKQHEILFA NQCQAMINVI EIWLNGMYKL 300 RHNWATTFSN TRFSARLLAT SRSEGTNSML KKANNRTISL YDFFVEDPSF VGPFFILFKV 360 KSLNQYSRIR NVWLDKHKNV VKCSCYKFES MGILHALKVL NHVQVHSLPK QYIKKRWMKS 420 MRNRVSDIGS GSRKNCQSNE TIVLDPIFVN LRGITNARIP RHLDKQSRKV KGK

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MKLIIFVNSQ VCHYWVQSIS SIIDEVDSRL AVGQVVKSVE DAYFLGGSGC NLPYFLYCDY  60
AHAKGFSIRK GDQPYFPCSN ELQAKEFECS CRGPTIKTKC KARPGIGQEK EEEWKVTRFI  120
MEHNHEMGEV DQTYLLRSSQ AIVNVGISVA SAVSYMEKKA HGPENLRFTR KDAYDYIRSL  180
KKHRKIENGD ASKLIKYFLN KSNNEPYFYW DMQLDDDNRV MNFFFRDYRC RIDYESFGDV  240
LSQNVMFGLA FMSDEKESFE WLFRTFLESM SGKQHEILFA NQCQAMINVI EIWLNGMYKL  300
RHNWATTFSN TRFSARLLAT SRSEGTNSML KKANNRTISL YDFFVEDPSF VGPFFILFKV  360
KSLNQYSRIR NVWLDKHKNV VKCSCYKFES MGILHALKVL NHVQVHSLPK QYIKKRWMKS  420
MRNRVSDIGS GSRKNCQSNE TIVLDPIFVN LRGITNARIP RHLDKQSRKV KGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	7e-20	FAR1 family protein