PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26514.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 331aa    MW: 37449.7 Da    PI: 4.7845
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26514.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.51.5e-29121181158
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                 ldDgynWrKYGqK++ g+++pr+YYrCt++   gC ++k+v+r+++dp+++e++Y+g+H++
  PIN26514.1 121 LDDGYNWRKYGQKDILGTNHPRAYYRCTHRntqGCLATKQVQRADDDPSIFEVIYRGKHTC 181
                 59***************************98889*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MEGRKTVIGV LTQGRDLANE LKRQLNPITT SREDCDVLVQ RILSSYENAL KLLDCMALLG  60
NGDPSIAKIL ESPNSLQGSL ISEGSDEDSK DQHHKFKKRK TLPRWSEQVR VGPGTGFEGQ  120
LDDGYNWRKY GQKDILGTNH PRAYYRCTHR NTQGCLATKQ VQRADDDPSI FEVIYRGKHT  180
CLQERVKQNK ENRKKQDESR QAHSQQMMII NEPVLKAEPQ ELNTNEETQF LSFTFPSTPV  240
ESENIETQFF SEAKNFITTS YSPSFLSPAT SESYFSLSPC PVNDFGFGSD PDFAEIISNP  300
TPVMDLPLGD LDVSIDQLDF SSQFLDPAEY F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.11e-47WRKY family protein