PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN26401.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Trihelix

Protein Properties

Length: 408aa MW: 45958.9 Da PI: 6.4554

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN26401.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	82.8	4.4e-26	83	167	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e+++Li +r+e++ ++++k++k+lW+ +s kmre+gf rsp++C++kw+nl k++kk k+++++++ + s ++ y++++e PIN26401.1 83 WVQEETRTLISLRKEIDMLFNTSKSNKHLWDNISMKMREKGFDRSPTMCTDKWRNLLKEFKKAKQNNQEGNGNGSAKMNYYKEIE 167 *********************************************************************9********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MYMSDKSQQQ NESAIDFYNN GKQEAPHHNS NMIIQLPPQP HHHLADGGAT TPSGGDETAN 60 NTTNHNSSNP ATSSAPKKRA ETWVQEETRT LISLRKEIDM LFNTSKSNKH LWDNISMKMR 120 EKGFDRSPTM CTDKWRNLLK EFKKAKQNNQ EGNGNGSAKM NYYKEIEEIL RERNKNGPSW 180 KNPEASSNTA GVGVSKVDSF MHFADKGIDD TSLTFGPVEA NGRSTLNLER RLDHEGHPLA 240 ITAADTVGAS GVSPWNWRGT PGSGEQTNTY DGRVITVKLG EYTKRIGIDG SADAIKEAIK 300 SAFRLRTKRA FWLEDEDNVV RTLDRDMPLG NYTLHVDEGL TIKVCFYEES DPLPVHAEDK 360 TFYTEDDFRD FLSRRGWACL REYNGYRNID SMDELCPGAI YRGVNLGH

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MYMSDKSQQQ NESAIDFYNN GKQEAPHHNS NMIIQLPPQP HHHLADGGAT TPSGGDETAN  60
NTTNHNSSNP ATSSAPKKRA ETWVQEETRT LISLRKEIDM LFNTSKSNKH LWDNISMKMR  120
EKGFDRSPTM CTDKWRNLLK EFKKAKQNNQ EGNGNGSAKM NYYKEIEEIL RERNKNGPSW  180
KNPEASSNTA GVGVSKVDSF MHFADKGIDD TSLTFGPVEA NGRSTLNLER RLDHEGHPLA  240
ITAADTVGAS GVSPWNWRGT PGSGEQTNTY DGRVITVKLG EYTKRIGIDG SADAIKEAIK  300
SAFRLRTKRA FWLEDEDNVV RTLDRDMPLG NYTLHVDEGL TIKVCFYEES DPLPVHAEDK  360
TFYTEDDFRD FLSRRGWACL REYNGYRNID SMDELCPGAI YRGVNLGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G25990.1	1e-166	Trihelix family protein