PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN26394.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

G2-like

Protein Properties

Length: 466aa MW: 52490.5 Da PI: 6.8341

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN26394.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.5	1.7e-24	104	157	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt +LH++Fv+av+q+ G ek Pk+il+lm+v+ Lt+e+v+SHLQkYRl PIN26394.1 104 KARVVWTVDLHQKFVKAVNQI-GFEKVGPKKILDLMGVPWLTRENVASHLQKYRL 157 68*****************.9*****************************8 PP
2	Myb_DNA-binding	41.3	3.6e-13	106	156	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT ++++++v+av+q G + +k+I mg +t++++ s++qky+ PIN26394.1 106 RVVWTVDLHQKFVKAVNQIGFEkvGPKKILDLMGvPWLTRENVASHLQKYR 156 678***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MSVDGETSRV MKGVQHGACD YLLKPIRMKE LKNIWQHVFR KRIHEVRDIE GQESLEEIQM 60 MRSGMEHLDD GYFFNGDLIS GKKRKDVDNK HDDRVCGDPS SVKKARVVWT VDLHQKFVKA 120 VNQIGFEKVG PKKILDLMGV PWLTRENVAS HLQKYRLYLT RLQKENELKA TLGGTKHPDI 180 PPKENVCLQN SIPQNATSVK QNILANETHA ASASGHRILL HNDEPKICDG NMKGILSMPM 240 TDSKKALFGD TNDLSKCSTS RIGFNHSFPP LDSDVKSKPP IRIQYSWSTE VPPLQFKQEP 300 KPHFRSDQRS DHLPLPMQHI DSVESSVPHN PGTSKENDKP ISQGIGKVTK IDTTAGLFAP 360 IDLIPCAVLN TKNPNLEQDL FGNLESSQKN LFVGTGSALR LWDEEFNNYS SSQGDFYPPN 420 AYLGNIESFT YGIPELFPDI PPYLYDSFNP NDVVEYPVMD QGLSIV

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MSVDGETSRV MKGVQHGACD YLLKPIRMKE LKNIWQHVFR KRIHEVRDIE GQESLEEIQM  60
MRSGMEHLDD GYFFNGDLIS GKKRKDVDNK HDDRVCGDPS SVKKARVVWT VDLHQKFVKA  120
VNQIGFEKVG PKKILDLMGV PWLTRENVAS HLQKYRLYLT RLQKENELKA TLGGTKHPDI  180
PPKENVCLQN SIPQNATSVK QNILANETHA ASASGHRILL HNDEPKICDG NMKGILSMPM  240
TDSKKALFGD TNDLSKCSTS RIGFNHSFPP LDSDVKSKPP IRIQYSWSTE VPPLQFKQEP  300
KPHFRSDQRS DHLPLPMQHI DSVESSVPHN PGTSKENDKP ISQGIGKVTK IDTTAGLFAP  360
IDLIPCAVLN TKNPNLEQDL FGNLESSQKN LFVGTGSALR LWDEEFNNYS SSQGDFYPPN  420
AYLGNIESFT YGIPELFPDI PPYLYDSFNP NDVVEYPVMD QGLSIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-64	ARR-B family protein