PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26307.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 475aa    MW: 54361 Da    PI: 5.0019
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26307.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS1489.2e-461094745373
        GRAS   5 LlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIl 103
                   +  ea+++g++ela+ ++  l+e ++p g++m+R+a  + +  +              +++  ++++  + ++alk+ ++  P+ +f+hltaN+aIl
  PIN26307.1 109 FRAYGEAMENGHKELAKVIVMSLNEKSNPMGSTMERVAYNLFKSKE-------------HQSEYLRQESINNFITALKVVYQSLPLGRFAHLTANSAIL 194
                 55567899*****************************986554333.............33333444458899************************** PP

        GRAS 104 eavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvl....vakrledleleeLr 195
                 e++ ++ e++H+iD  i++G+QWp+L++aL+++++g   l++T ++  e++   + e eet++rL+  A+++g +fe++      +a++  dl +e + 
  PIN26307.1 195 ESMPNDmETLHVIDCHIGEGIQWPPLMEALSQKQKG---LKLTSIKYGEENpsLRWEFEETKKRLQCHAKQCGPKFEIEERstkdLAHSNYDLAYEVMG 290
                 ****998999**********************9998...******9977777688899********************996333333444566788888 PP

        GRAS 196 vkp....gEalaVnlvlqlhrlldesvsleserdevLklvkslsPk...vvvvveqe..adh.nse.sFlerflealeyysalfdsleaklpr.eseer 282
                 +k+    +E l+ ++++ l ++ ++++ ++   +e+L++ k+l ++   ++v+ + e  +++ ns+  F   + + +  y a+f+sle ++p   se+r
  PIN26307.1 291 TKKngqgKEWLVFKCMVGLPHMGRRRARSS--VKEFLRIAKELLANfegILVFGNGEagVSLdNSScGFTSFLDQLVTQYGAIFESLERNFPVfLSEAR 387
                 8889999***************95555444..69*********997666899988884444454443677666777789************98356*** PP

        GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaW 373
                 + +E  +lg+ ++ +   eg +   r+       +  +e G++  +ls++  ++ak ++++ + + y+v+    +++++vl Wk+ pL+ +S W
  PIN26307.1 388 TAIESLFLGPFLCPIAWSEGWKEMRRRC------NLEGETGLEGPKLSQESLAEAKEIVNEGE-NLYNVKiegLREHEMVLQWKETPLIRISTW 474
                 *********************9555544......45589**********************99.669999545559****************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
MAEFHRSIII TRIIKYEVSF SIANNFSSLF DSSTVSSNSY DPLPFSNEVF DLENLETFSS  60
KEIEEICKWI NANETEENSC LYLEYIKNSI ILPTEEMELD NQLSLLHLFR AYGEAMENGH  120
KELAKVIVMS LNEKSNPMGS TMERVAYNLF KSKEHQSEYL RQESINNFIT ALKVVYQSLP  180
LGRFAHLTAN SAILESMPND METLHVIDCH IGEGIQWPPL MEALSQKQKG LKLTSIKYGE  240
ENPSLRWEFE ETKKRLQCHA KQCGPKFEIE ERSTKDLAHS NYDLAYEVMG TKKNGQGKEW  300
LVFKCMVGLP HMGRRRARSS VKEFLRIAKE LLANFEGILV FGNGEAGVSL DNSSCGFTSF  360
LDQLVTQYGA IFESLERNFP VFLSEARTAI ESLFLGPFLC PIAWSEGWKE MRRRCNLEGE  420
TGLEGPKLSQ ESLAEAKEIV NEGENLYNVK IEGLREHEMV LQWKETPLIR ISTWM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.17e-24GRAS family protein