PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN26190.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 143aa MW: 16121.4 Da PI: 10.7556 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 31.4 | 4.8e-10 | 103 | 142 | 1 | 47 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaai 47 + +GV+++ +W A I++ +k+++lg+ g+ eeAa++++ PIN26190.1 103 CVMRGVYFKN--LKWQAAIKVD-----KKQIHLGTVGSQEEAARLYD 142 568****966..5********4.....5******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MVSIRRRKLL GMCSGRNSFL APLPWAFGHG HAPENGADNT KLASVHPLPS NDKPKEETSL 60 ETGLGSSNVS ASSPSKEHPM QHFPEVKRRK RHRRKQVENQ EPCVMRGVYF KNLKWQAAIK 120 VDKKQIHLGT VGSQEEAARL YDR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 3e-25 | ERF family protein |