PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26038.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 271aa    MW: 29659.5 Da    PI: 10.0881
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.63e-1386130347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + ++lG+g+W+ I++     Rt+ q+ s+ qky
       PIN26038.1  86 PWTEEEHRQFLLGLQKLGKGDWRGISKNYVPSRTPTQVASHAQKY 130
                      8**************************9999*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MTRRCSHCNS NGHSTRSCST RSGGGGGGLR LFGVRLTDGS FIKKSASMGN LSHYSASSDS  60
PEGYHSDEPD HGFAARRRPI RKKGTPWTEE EHRQFLLGLQ KLGKGDWRGI SKNYVPSRTP  120
TQVASHAQKY FIRQSSVPKK KKRPSLFDIV PNMETSSSGE QLNFPPQAIG MDNEKITLSS  180
SRKADLDNSL PSLDLSLKPA FMLLPFQLWP PNAYSLGDEV ATSYHHNVKT VAAAPDEPLK  240
DLVGMSQLTL GETSPVKVES SPFSLMLSGK P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1138144PKKKKRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.12e-38MYB_related family protein