PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN25894.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | GRF | ||||||||
Protein Properties | Length: 320aa MW: 36481.5 Da PI: 9.4126 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 79.2 | 4e-25 | 79 | 122 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e PIN25894.1 79 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVE 122 79***************************************986 PP | |||||||
2 | QLQ | 57.6 | 3.9e-20 | 11 | 45 | 2 | 36 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTa+Q+q+L++Q+l++Ky+++++PvPp+Ll+ i+ PIN25894.1 11 PFTASQWQELEHQALVFKYMISGLPVPPDLLFTIR 45 8******************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 320 aa Download sequence |
MNSNGRSCKF PFTASQWQEL EHQALVFKYM ISGLPVPPDL LFTIRRGLDS SSLSSKFLIH 60 QAQNIGWKSF HMGFGGKIDP EPGRCRRTDG KKWRCSKDAY PDSKYCERHM HRGRNRSRKP 120 VEILSQNAIP INVNKSSSIT NKNTTNPSNS YLASPSEPRF LYSHFSSPRP PGLALSSQEN 180 TTNFNFLEPN AHSHKDFRHG SYYGEGAKGE TEEANSISDS SWKLTMGSSL SQIKPNAYSS 240 DLQSRQWNES LNGHYYPSDM PSNIERDIDQ PKKVTHHFLD EWEPKDKDSW PSSENKLSSN 300 RTQLSISIPN SLHDFFMTQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 2e-55 | GRF family protein |