PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN25844.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 325aa MW: 36125.2 Da PI: 9.8184

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN25844.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.2	1.7e-14	158	205	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++h +ErrRR+++N++f Lr+l+P +K++K++iL ++eY+k+L+ PIN25844.1 158 ATHVLAERRRREKLNERFIILRSLVPFV-----TKMDKVSILGDTIEYVKQLR 205 5899*********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MQLDMSEDIR LGSPPDDGSN NLDSDFNLLA VSQSGNTAVH HRDRWPVKDH TSASLQPLQS 60 GNLPQEDAHY SQTVSAILQN QSLRCSNPSS TTATSSVASA FTKWSATPSA ISTHRHTLLL 120 DGAAQWTLKY ILFTVPLLHT KSRDHTARKW IPPHQISATH VLAERRRREK LNERFIILRS 180 LVPFVTKMDK VSILGDTIEY VKQLRKKIQD LEAEKSGPKR KMRIVEHGGD GGKAKVVEEP 240 PPTAAVEVSI IESDALVEIE CVHKEGLLLD VMKVLRELRI EVTTVQSSIS NGVFAAELRA 300 KVKESANGRK ASIMEVKRSI NQILR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	164	169	ERRRRE
2	165	170	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	7e-59	bHLH family protein