PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25625.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Nin-like
Protein Properties Length: 311aa    MW: 33797.4 Da    PI: 6.8019
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25625.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK55.31.3e-174891649
      RWP-RK  6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49
                s+e++sk Fslp+ dAA +Lgvc++vLK+ C  +G+ RWP+Rk 
  PIN25625.1 48 SFEEVSKLFSLPLSDAAYSLGVCPSVLKQVCYDNGLVRWPYRKF 91
                699****************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MATGPPMMGT LQNPNPNPIP YPNRSPLQNS NPTLNPNPNP APGPKPPSFE EVSKLFSLPL  60
SDAAYSLGVC PSVLKQVCYD NGLVRWPYRK FLSGKSIEEI KKDDAIEKKQ HSQLKVAAER  120
SDSLAVSAVS SSLGPQPPST NTQGSPGLRA LTQPPTKDNQ TESSHNLHSS TVNRGNSSIV  180
DEFKYGFPSD GLSSVSFRWW GNKSDSDNGA DTEQGSEDAE KSEQQSKDST DTTVDEEVTE  240
GKKNETDSNT QWASSLSALR KKTAKEGKQA LKLGVYRVDS VKTLDRNKKK ALLQIFKSSL  300
PSEWADISSE S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.11e-08Nin-like family protein