PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN25584.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 288aa MW: 32257.9 Da PI: 6.0566

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN25584.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	108.3	1.1e-33	29	114	3	88
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg 88 g+kdrhsk++T++g RdRRvRls +a++f+d+qd+LG+d++sk+i+WL+++ak+ai++l++ + +a++++++++ +++s +++ PIN25584.1 29 GRKDRHSKVCTARGTRDRRVRLSPRTAIQFYDVQDRLGYDRPSKAIDWLMKEAKAAIDALNEPPPLDATNVTENQQMQQESGRGIT 114 79************************************************************955555444222322222222221 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MDIPPKLKAT RRKAEIIEVH GGRIIRSGGR KDRHSKVCTA RGTRDRRVRL SPRTAIQFYD 60 VQDRLGYDRP SKAIDWLMKE AKAAIDALNE PPPLDATNVT ENQQMQQESG RGITQNLENL 120 NNDNPSSSFG FLSNGPDFQA YPSDDFSLSI SRREAPDDSV PYPNYNHEDF FSAPLTTTSE 180 IFDLEMARLQ RIFTWNYANA RGAGEDYSSV HSLPLNFPAG SPVLGLGQMF SQREPLQSRI 240 TSFSPITSQF PGISFSSDEL PNFTTAASLK ENEMEKVAAS TAFLHYEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	1e-38	TCP family protein