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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN25538.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HB-other | ||||||||
Protein Properties | Length: 133aa MW: 15771.1 Da PI: 9.7913 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 44.9 | 1.9e-14 | 4 | 54 | 6 | 56 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +f+++qle+L ++F+++ ++++e++ eL + +gL+ +q+ WF rRa+++ PIN25538.1 4 RFENHQLEVLRAAFRESENLTKEKKNELVAATGLDVEQIASWFSHRRARKR 54 69***********************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence |
MAKRFENHQL EVLRAAFRES ENLTKEKKNE LVAATGLDVE QIASWFSHRR ARKRSKEAMA 60 ELELEHSRPK QAIKISRGNE AQLKKELLES KKREAELQDE NWRLKERITI AESDKQFCLL 120 KKWIAYPDTY MDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 3e-07 | HD-ZIP family protein |