PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN25348.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | Dof | ||||||||
Protein Properties | Length: 283aa MW: 31063.3 Da PI: 8.2917 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 126.5 | 7.8e-40 | 36 | 97 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ke+al+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrn+PvGgg+rknk+sss PIN25348.1 36 KEQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSS 97 7899******************************************************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MDTAQWPQEI VVKPMEEIVT TNPKPSSMER KIRPQKEQAL NCPRCNSTNT KFCYYNNYSL 60 SQPRYFCKTC RRYWTEGGSL RNIPVGGGSR KNKRSSSSSL SSSSSSISTN PSSSMSSSPT 120 VKKLPDLVGP AMNNIIPHLQ NPKNIIIHQE NIHQDLNLGF SSSPHDFKAI NELIQVPNFE 180 NNTKDLLQNN PCSSFMTSSS GFCLPSLNFS LDHDHGSGSS NYGSFQGEQE TNGKLLFPFQ 240 GLKVIGDSGH GSAERNSDQN GDHHNQNHNS SAGYWSGVIG GGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24060.1 | 3e-57 | Dof family protein |