PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25317.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 621aa    MW: 71402.6 Da    PI: 7.2954
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25317.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS363.33.5e-1112496192374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++ L++cAeavss +++  q+lL+++++++sp+gd+++Rla++f++AL+ar+++++s ly+al+ ++ s    +e l++++ ++ +sP+ ++s++ aN+
  PIN25317.1 249 TSMLTRCAEAVSSFNNTTGQKLLNQIRQHCSPHGDANERLAHCFANALEARMTGTGSALYAALARKRIS---AAELLKSYQSYVTASPFKRMSNIFANK 344
                 678**********************************************************99999998...9************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                  I + + +++++HiiDf+i +G+QWp+ +q ++ R +gpp l+iTg++ p++g   +e++ +tg+rL +++++++vpfe+n+ +akr++d++l++L+++
  PIN25317.1 345 SIGRYTREASKIHIIDFGILYGFQWPCVIQGISLRLRGPPFLKITGIDFPQPGfkPAERVDQTGRRLMNYCQRFNVPFEYNA-IAKRWDDIRLDDLKIE 442
                 ****************************************************999***************************.7*************** PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 ++E+++Vn+ ++l ++ des+ ++s+r++vLkl+k+++P+++v+      +n++ F++rf eal +ys++fd++ea+lpre+++r  + re++gr+++n
  PIN25317.1 443 RDEMVVVNCLYRLRHVADESAGINSPRNAVLKLIKKINPDLFVHGVVSGTYNAPFFATRFREALFHYSSFFDMMEATLPREDQDRLLYKREVFGRDVMN 541
                 *************************************************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqakll.lrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 ++aceg+er+er et+++W+ r ++aGF+++pl+ ++  ++k+  lr ++sd + ++e+s+++++gWk+r ++++S+W+
  PIN25317.1 542 IIACEGSERIERPETYKQWQVRNQRAGFRQLPLNREILREVKTKvLRGYHSD-FLLDEDSEWMLQGWKGRVMYALSCWK 619
                 *****************************************98615555566.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 621 aa     Download sequence    
MQHVQSQIHR HHQTNPSPGD DGTPVACDYF GGVYDYIKQM LMEEDDLEDR PCMFQDCSAL  60
QAAEKYFYDA LSDKSTAPIN GNSDLDSSGS SFPPCSPLES QIYEEGLYQV VRFSSNSGQG  120
HEISQPSFFE INEPIERNVQ VEAGEKENSP KKTHDREENG DCGEERNIKQ LAGYAEESFQ  180
MEKYDKSLLC PKMNPGFYNE SPSCQSEETS EESEEEKRKK QYRKTKEVKR GRPKGSKKNS  240
VRREVIDLTS MLTRCAEAVS SFNNTTGQKL LNQIRQHCSP HGDANERLAH CFANALEARM  300
TGTGSALYAA LARKRISAAE LLKSYQSYVT ASPFKRMSNI FANKSIGRYT REASKIHIID  360
FGILYGFQWP CVIQGISLRL RGPPFLKITG IDFPQPGFKP AERVDQTGRR LMNYCQRFNV  420
PFEYNAIAKR WDDIRLDDLK IERDEMVVVN CLYRLRHVAD ESAGINSPRN AVLKLIKKIN  480
PDLFVHGVVS GTYNAPFFAT RFREALFHYS SFFDMMEATL PREDQDRLLY KREVFGRDVM  540
NIIACEGSER IERPETYKQW QVRNQRAGFR QLPLNREILR EVKTKVLRGY HSDFLLDEDS  600
EWMLQGWKGR VMYALSCWKP L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-172GRAS family protein