PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN25148.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | B3 | ||||||||
Protein Properties | Length: 154aa MW: 17573.9 Da PI: 5.0118 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 43.2 | 7e-14 | 38 | 124 | 4 | 96 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 vl s+v+ s +l +p + ++e + ++ ++ + + W++ + ++ ++ l + Wk+Fv++n+Lk gD +vF+l+++s+ + ++kv PIN25148.1 38 VLGMSHVSPSYQLPIPARIVRELPQA---TVPVV-LRYNCKNWNLSY--MGNCSSPRLDSKWKNFVNDNNLKIGDACVFELMENSSSNIRFKV 124 55568888889999999999888533...22344.44588*******..999999*************************9977555555544 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
MEQPLQQSSE PKDNEKEVEK YEEDDISYLS GKPFFDVVLG MSHVSPSYQL PIPARIVREL 60 PQATVPVVLR YNCKNWNLSY MGNCSSPRLD SKWKNFVNDN NLKIGDACVF ELMENSSSNI 120 RFKVHILRGD LPPELRAKVD GRGQATENNP MQVD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 4e-11 | B3 family protein |