PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25130.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 278aa    MW: 30490.1 Da    PI: 9.7038
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25130.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.24.4e-14108152347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r + ++Rt+ q+ s+ qky
       PIN25130.1 108 PWTEEEHRTFLMGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKY 152
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGRKCSHCGN IGHNSRTCNA SRLQINNNSN GGGVRLFGVQ LDISSSISSI PIKKSLSLDC  60
LSTSTPASSS SSLSSSRLPH NDHFDKPSIG YLSDGTLGRH LDRKKGVPWT EEEHRTFLMG  120
LEKLGKGDWR GISRNFVTTR TPTQVASHAQ KYFLRQAALS KKKRRSSLFD MVGANHTSSE  180
AALTTNSAQR HIDLNSCEED KKTKGQECEE HFQMKSHQNF IWAYESLNPQ PTSATNKAMS  240
FGYPNAAPEL ELTLSAPRTM GQNESSTTSL LMGPISVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161165KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.16e-56MYB_related family protein