PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25076.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 349aa    MW: 39189.5 Da    PI: 6.5297
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25076.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.52.4e-057798223
                EETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                kC++C++ F ++ n++rH r+H
  PIN25076.1 77 KCEKCSREFCSPVNYRRHVRVH 98
                7*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MATAKLCSSG TFNSIKSEEG TDSVDTFFKQ TTGKEPLLPF SRTVDSPVQW IQLLHALDQP  60
DLPGWPLLTP LKVQMQKCEK CSREFCSPVN YRRHVRVHRR SLNVDKESHK NRDLLAAFWD  120
KQSLEQAKEI LSFDDVMLKE IPGSSVINSL GSSLRKPGVW TLPQIYVKAG SALLDIIQAK  180
PSRLPISSQE LFSILDDASE RTFLCAGSAE SLRKYVFDGE TAKNSFELKN LVATVSFLVE  240
QKLVKAWVAD KDAEALRCQK LLVEEEEAAQ KRQAVLLERK KQKKLRQKEQ KLKEQFYGGN  300
ANLSFNVDAA DETTSAEASE PSPPSDSNSY SPDMPTNLDF CLESTEPQR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1278285ERKKQKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25610.11e-103C2H2 family protein