PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25002.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 271aa    MW: 29936 Da    PI: 6.4223
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25002.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2193.9e-066183123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C++C+k F++k  L  H++ H
  PIN25002.1 61 YSCKYCDKKFTNKQALGGHQNAH 83
                99******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MESPDEGKNG GPSRSSEGLV PTEPPQFLEE PSMDGENMVP NEIPQLLEGS PMANPDPDRE  60
YSCKYCDKKF TNKQALGGHQ NAHKVERAIE KSAREMHENP FGFGGSSVYP GLASSPYLGS  120
YNRFHDFMNR SNMNRPPYPV QQQQQPMQHY YGYNPRPGLS IGGEGSYIPH LLPGVSSMFP  180
GYPGHRPLLP PQFSRQPSNM PNHALNRHFS NIGEASASSS ARPPLSQGLL TNFIGSRPRV  240
ENNRDGGNNN QRNDTGEERV GDSDLDLSLK L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.15e-12C2H2 family protein