PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24937.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 221aa    MW: 25476.4 Da    PI: 8.6547
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24937.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.78.8e-0579101123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C k+F ++  L  H++ H
  PIN24937.1  79 FECEYCLKVFANSQALGGHQNAH 101
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MERNTVSYTA NSGEEKKLRL FGIELDLFPD SSQIRESKGF SEEGDESINS SSSSTVTEKP  60
EKSSARGGAA LQLPQEKKFE CEYCLKVFAN SQALGGHQNA HKKERMRKKR LQLQSRKDNI  120
NYCKSYFNYC NGSNPTWLYD PSNLNDEKLI NFCTDFNIND REALRCDELS DQCISFRQDR  180
HRFSLTRVEM LREKSRALSH KPLSSSNYSK KIGRRTSLDL E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.13e-12C2H2 family protein