PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN24888.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | WOX | ||||||||
Protein Properties | Length: 164aa MW: 18885 Da PI: 7.2135 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 41.8 | 1.8e-13 | 26 | 65 | 22 | 57 |
SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 22 nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +++p+++++++++++l +++ ++V++WFqN++a+e++ PIN24888.1 26 TKTPTTDQIQKISSQLsfygKIESKNVFYWFQNHKARERQ 65 799***********************************97 PP | |||||||
2 | Wus_type_Homeobox | 76 | 5.6e-25 | 24 | 67 | 22 | 65 |
Wus_type_Homeobox 22 sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +G++tP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ PIN24888.1 24 TGTKTPTTDQIQKISSQLSFYGKIESKNVFYWFQNHKARERQKR 67 599***************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MDDYSAGFRI RTSRGGTGGG GTGTGTKTPT TDQIQKISSQ LSFYGKIESK NVFYWFQNHK 60 ARERQKRRRV LVDEDYDINM HLHDHTNKIS STKHFAEINY QVPEPERSIE TLQLFPLNSF 120 SETDHCSDKL RLFTDACKEN NVSLSYNISS EMDHPTLDLR LSFL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 66 | 70 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11260.1 | 7e-36 | WOX family protein |