PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24495.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 309aa MW: 34943.8 Da PI: 5.9945

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24495.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.8	2.5e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd lv +v+++G+g+W+++++t g++R+ k+c++rw +yl PIN24495.1 14 KGPWTPEEDIMLVTYVQEHGPGNWRAVPNTTGLRRCSKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	49.6	9e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T E+++++++ ++lG++ W++Ia++++ Rt++++k++w+++l PIN24495.1 67 RGSFTDHEEKIIIQLQELLGNK-WAAIASYLP-ERTDNDIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MGRPPCCDKV GVKKGPWTPE EDIMLVTYVQ EHGPGNWRAV PNTTGLRRCS KSCRLRWTNY 60 LRPGIKRGSF TDHEEKIIIQ LQELLGNKWA AIASYLPERT DNDIKNYWNT HLKKKLKKLQ 120 SGSGDNQSRF SSNSHSISRG QWERRLQADI STAKQALQDA LSPENTSHLS ESYTKPVQSY 180 SYASSTENIA RLLKDWVKNT PKSEESKCSS TQNSTNNYSD ELTPSTHCTE GKSGIDLSEA 240 FESLFGFETF ESPNSEEFSR SGSPSLACDE IKPDPSDLAP LSMLDNWLLD DLRKDYLTNL 300 SFDENPDLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47600.1	8e-96	MYB family protein